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  5. AT1G03010

AT1G03010


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G03010

Target Alias Description ECC score Gene Family Method Actions
AT3G08660 No alias Phototropic-responsive NPH3 family protein 0.06 OrthoFinder output from all 47 species
Azfi_s0090.g042710 No alias not classified & original description: CDS=300-2192 0.01 OrthoFinder output from all 47 species
Dac_g07002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13792 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
BP GO:0009860 pollen tube growth IEP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
MF GO:0010487 thermospermine synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016768 spermine synthase activity IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048759 xylem vessel member cell differentiation IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:1905177 tracheary element differentiation IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 205 479
No external refs found!