AT1G02360

Description : Chitinase family protein

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G02360
Cluster	HCCA: Cluster_43

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.05	OrthoFinder output from all 47 species
AMTR_s00001p00243570	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.05	OrthoFinder output from all 47 species
AMTR_s00001p00243680	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.04	OrthoFinder output from all 47 species
AMTR_s00001p00243780	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00199730	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AT2G43570	CHI	chitinase, putative	0.04	OrthoFinder output from all 47 species
AT2G43590	No alias	Chitinase family protein	0.04	OrthoFinder output from all 47 species
AT2G43620	No alias	Chitinase family protein	0.08	OrthoFinder output from all 47 species
AT3G54420	ATEP3, EP3,...	homolog of carrot EP3-3 chitinase	0.09	OrthoFinder output from all 47 species
AT4G01700	No alias	Chitinase family protein	0.06	OrthoFinder output from all 47 species
Aev_g04564	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g12023	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g18092	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g38851	HCHIB, B-CHI,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g35678	ATEP3, EP3,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene23821.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32083.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32084.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32098.t1	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene32113.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32119.t1	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32152.t1	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000740	No alias	not classified & original description: CDS=1-501	0.05	OrthoFinder output from all 47 species
Azfi_s0001.g000741	ATEP3, EP3,...	not classified & original description: CDS=226-924	0.04	OrthoFinder output from all 47 species
Azfi_s0001.g000746	ATEP3, EP3,...	not classified & original description: CDS=491-1327	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000750	ATEP3, EP3,...	not classified & original description: CDS=1-942	0.03	OrthoFinder output from all 47 species
Dcu_g25280	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g18506	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
GSVIVT01038111001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038116001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038120001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038126001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Gb_14113	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 297.0)	0.03	OrthoFinder output from all 47 species
Gb_14116	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 409.0)	0.03	OrthoFinder output from all 47 species
Gb_20764	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_34557	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os01g18400.1	LOC_Os01g18400	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.06	OrthoFinder output from all 47 species
LOC_Os02g39330.1	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
LOC_Os04g09390.1	LOC_Os04g09390	Lectin OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os05g33140.1	HCHIB, B-CHI,...	Chitinase 9 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os06g51050.1	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os06g51060.1	HCHIB, B-CHI,...	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os10g39680.1	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Len_g47568	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.05	OrthoFinder output from all 47 species
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_10431378g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_10431378g0020	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_10435326g0010	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_1327504g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_191308g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_295712g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_36141g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_4970836g0010	HCHIB, B-CHI,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_5029466g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_530083g0010	HCHIB, B-CHI,...	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_7544918g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_80085g0010	HCHIB, B-CHI,...	Basic endochitinase C OS=Secale cereale...	0.05	OrthoFinder output from all 47 species
MA_8921185g0010	HCHIB, B-CHI,...	Basic endochitinase C OS=Secale cereale...	0.03	OrthoFinder output from all 47 species
MA_8960362g0010	HCHIB, B-CHI,...	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 81.6)	0.04	OrthoFinder output from all 47 species
Mp4g20440.1	HCHIB, B-CHI,...	Endochitinase 1 OS=Theobroma cacao (sp\|q41596\|chi1_thecc : 235.0)	0.04	OrthoFinder output from all 47 species
Mp4g20470.1	HCHIB, B-CHI,...	Basic endochitinase B OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp5g21830.1	HCHIB, B-CHI,...	Endochitinase CH25 OS=Brassica napus...	0.02	OrthoFinder output from all 47 species
Ore_g29831	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30042	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g32598	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g32610	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo419028	No alias	No description available	0.03	OrthoFinder output from all 47 species
Smo443112	HCHIB, B-CHI,...	Basic endochitinase B OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc02g082960.3.1	HCHIB, B-CHI,...	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.06	OrthoFinder output from all 47 species
Solyc03g116240.3.1	HEL, PR4, PR-4,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Spa_g10006	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g25258	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002252_P001	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Zm00001e015056_P001	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e041138_P001	ATEP3, EP3,...	Endochitinase B (Fragment) OS=Zea mays...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002679	respiratory burst involved in defense response	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045730	respiratory burst	None	Extended
BP	GO:0050832	defense response to fungus	IEP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	34	265

External Links

No external refs found!

AT1G02360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation