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  5. AT1G02030

AT1G02030


Description : C2H2-like zinc finger protein


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G02030

Target Alias Description ECC score Gene Family Method Actions
Aob_g26594 CZF2, ZAT6, C2H2 C2H2-type subclass ZAT transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g30884 No alias regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species
GSVIVT01031461001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_37343 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Lfl_g06210 No alias regulatory protein *(DAZ) of male germ cell division &... 0.03 OrthoFinder output from all 47 species
Lfl_g18812 AZF1, ZF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_602g0010 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g008440.1.1 Solyc09g008440 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e019350_P001 Zm00001e019350 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP HCCA
BP GO:0000018 regulation of DNA recombination IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005798 Golgi-associated vesicle IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030140 trans-Golgi network transport vesicle IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045910 negative regulation of DNA recombination IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1900150 regulation of defense response to fungus IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!