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  5. Pnu_g28190

Pnu_g28190


Description : not classified & original description: none


Gene families : OG0002286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g28190
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00267520 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00032490 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G04990 No alias Protein of unknown function (DUF761) 0.05 OrthoFinder output from all 47 species
AT5G54300 No alias Protein of unknown function (DUF761) 0.04 OrthoFinder output from all 47 species
Adi_g113020 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene48347.t1 Aspi01Gene48347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70357.t1 Aspi01Gene70357 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70358.t1 Aspi01Gene70358 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.39G026200.1 Ceric.39G026200 not classified & original description: pacid=50582435... 0.03 OrthoFinder output from all 47 species
Dcu_g15336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029463001 No alias No description available 0.05 OrthoFinder output from all 47 species
Lfl_g00832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g006620.3.1 Solyc03g006620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 109 143
No external refs found!