Heatmap: Cluster_39 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
Pnu_g00291 (MFT)
-5.21 -5.31 1.91 -2.47
-0.63 -0.68 1.01 -0.47
-4.74 -3.48 1.89 -2.49
-2.22 -2.4 1.65 -1.13
-1.96 -2.11 1.68 -1.75
Pnu_g02451 (HRE2)
-1.68 -2.36 1.69 -1.88
-1.84 -2.12 1.68 -1.8
-4.27 -3.99 1.88 -2.33
-1.92 -2.4 1.76 -2.58
Pnu_g03828 (CHS)
-2.89 -3.52 1.76 -1.32
-6.43 -3.2 1.9 -2.75
-0.73 -1.05 1.19 -0.67
-2.72 -2.44 1.8 -2.4
-1.72 -1.38 1.66 -2.65
-1.66 -0.83 1.39 -0.98
-1.56 -1.95 1.67 -2.19
-5.73 -3.34 1.83 -1.64
-0.82 -0.8 1.22 -0.92
Pnu_g06475 (ATH15)
-4.14 -1.65 1.83 -3.89
-1.58 -1.72 1.63 -1.87
-4.01 -2.2 1.68 -0.96
-0.8 -1.15 1.38 -1.43
Pnu_g07678 (ERF9)
-3.34 -2.85 1.8 -1.89
-2.66 -1.92 1.67 -1.35
-2.92 -2.06 1.84 -4.47
-1.56 -1.36 1.5 -1.19
Pnu_g08994 (EXL3)
-3.43 -3.51 1.87 -2.57
-0.49 -0.49 0.92 -0.55
-2.12 -1.15 1.5 -1.05
Pnu_g09943 (ERF9)
-4.36 -2.04 1.64 -0.75
-0.64 -1.27 1.32 -1.16
Pnu_g11077 (JAI3)
-3.96 -2.55 1.75 -1.28
-2.32 -1.52 1.6 -1.27
-0.66 -0.86 1.12 -0.65
-2.98 -3.72 1.9 -4.23
-7.24 -5.6 1.94 -2.78
- - 1.94 -2.52
-1.35 -1.42 1.36 -0.59
Pnu_g15713 (KAB1)
-0.84 -0.82 1.21 -0.85
-5.9 -3.05 1.86 -2.15
- - 1.93 -2.35
-5.61 -5.22 1.97 -5.36
-2.79 -1.65 1.68 -1.56
- - 1.98 -4.19
-6.51 -6.44 1.97 -4.41
Pnu_g17370 (SLY1)
- -6.93 1.96 -3.42
Pnu_g17526 (NAC025)
-3.35 -1.54 1.57 -0.79
-2.6 -2.53 1.84 -3.56
Pnu_g18094 (BEH4)
-3.18 -2.63 1.7 -1.08
Pnu_g18304 (XTR2)
-1.55 -1.15 1.48 -1.23
Pnu_g18339 (GATL3)
-4.11 -3.11 1.87 -2.54
Pnu_g18593 (HAT5)
-2.48 -1.41 1.53 -0.85
Pnu_g18674 (UGT85A2)
-4.97 -3.47 1.88 -2.39
-1.15 -1.19 1.27 -0.51
- - 2.0 -8.05
-1.35 -1.79 1.43 -0.66
-2.16 -3.14 1.77 -2.03
-4.44 -2.97 1.87 -2.45
- - 1.98 -4.24
Pnu_g20109 (TMK1)
-4.0 -3.43 1.87 -2.49
Pnu_g20196 (PUB23)
-5.96 -3.63 1.92 -3.13
-8.66 -11.18 1.99 -6.46
Pnu_g21031 (CHS)
-2.36 -3.3 1.67 -0.96
Pnu_g21358 (NAP3)
-6.34 - 1.99 -5.33
-6.4 - 2.0 -
Pnu_g21397 (RSL4)
- -3.87 1.89 -2.1
Pnu_g21402 (ARR3)
-3.4 -7.94 1.95 -4.36
Pnu_g21418 (SCL3)
-4.82 -7.25 1.98 -5.86
-3.76 -6.2 1.96 -6.26
Pnu_g21615 (FMA)
-3.55 -6.09 1.9 -2.52
-2.47 -2.3 1.75 -1.93
- - 2.0 -
-3.39 -5.09 1.92 -3.61
-2.3 -2.75 1.8 -2.58
-2.4 -5.46 1.9 -4.5
-0.87 -0.97 1.2 -0.62
- - 2.0 -
Pnu_g22201 (RPT2)
-6.03 -5.4 1.96 -3.64
-2.82 -2.39 1.83 -3.16
- -4.44 1.94 -3.24
-1.38 -1.95 1.65 -2.15
Pnu_g22373 (BGLU40)
-10.14 -12.15 2.0 -8.33
Pnu_g22380 (GUS3)
-1.36 -1.71 1.69 -3.79
Pnu_g22390 (LEJ1)
- - 1.96 -3.06
Pnu_g22612 (ACR3)
-5.22 -5.23 1.85 -1.58
Pnu_g22619 (CRK8)
- - 2.0 -
-2.59 - 1.94 -
- - 2.0 -
-2.63 -3.4 1.74 -1.35
-3.61 -3.26 1.76 -1.25
Pnu_g22861 (BAM1)
-1.1 -1.36 1.59 -2.96
-1.14 -1.42 1.47 -1.32
-1.75 -2.45 1.79 -4.14
-2.05 -1.89 1.69 -1.94
Pnu_g23485 (UGT72B3)
-4.52 - 1.98 -
Pnu_g23566 (CSLC5)
-2.59 -2.35 1.78 -2.29
-3.47 -3.34 1.81 -1.77
- - 2.0 -
-4.57 -7.46 1.98 -
-0.77 -0.63 1.09 -0.66
-1.32 -1.13 1.43 -1.17
- -3.58 1.97 -
-3.64 -3.76 1.89 -2.84
-3.61 -2.98 1.77 -1.39
-5.87 -3.77 1.87 -2.01
-3.03 -2.51 1.88 -5.4
Pnu_g24579 (LOF2)
-1.31 -0.6 1.22 -0.73
-8.18 -10.09 2.0 -7.35
Pnu_g24693 (FMO1)
-2.19 -2.72 1.81 -3.14
- - 2.0 -
- - 2.0 -
-6.39 -7.82 1.99 -7.03
-2.91 - 1.95 -
-8.14 -8.63 1.99 -4.83
- - 1.96 -3.18
Pnu_g24936 (CYP707A3)
-3.74 -4.0 1.85 -1.97
-0.41 -0.32 0.71 -0.3
Pnu_g25123 (IQD5)
-6.12 -5.2 1.94 -3.03
-6.81 -6.72 1.98 -5.27
-1.44 -1.33 1.59 -2.19
-5.25 -6.11 1.97 -5.03
Pnu_g25304 (RABG3c)
-2.04 -2.83 1.75 -1.96
Pnu_g25313 (AS2)
-5.54 -5.18 1.86 -1.62
-1.57 -2.47 1.68 -1.88
-4.3 -3.25 1.91 -3.69
- - 2.0 -
Pnu_g25558 (CYP707A3)
-3.53 -5.25 1.96 -10.2
Pnu_g25568 (GGPS1)
- -7.27 2.0 -
-10.07 - 2.0 -
-2.44 -4.37 1.87 -3.31
- - 2.0 -
-1.47 -1.58 1.56 -1.52
- - 2.0 -7.32
-9.28 -9.31 2.0 -9.25
-8.41 -8.82 1.99 -6.44
-2.25 -3.89 1.77 -1.74
-4.99 -4.83 1.96 -4.89
-5.26 - 1.99 -
Pnu_g25881 (AAP3)
-3.45 - 1.97 -
-5.93 -6.84 1.96 -3.49
Pnu_g26106 (KCS4)
-4.24 -6.78 1.97 -6.86
-2.65 -2.78 1.83 -2.83
- - 2.0 -
-2.93 -2.81 1.83 -2.66
Pnu_g26363 (NAC025)
-2.49 -1.8 1.73 -2.15
-0.48 -0.43 0.82 -0.37
-2.78 -4.34 1.92 -5.02
-5.62 -3.81 1.92 -3.17
Pnu_g26646 (RAP2.2)
-2.02 -2.09 1.73 -2.35
Pnu_g26801 (ATM1)
-4.66 - 1.99 -9.99
-1.06 -1.87 1.57 -1.83
-2.36 -2.12 1.72 -1.81
Pnu_g27016 (LRL3)
- -10.83 2.0 -
-11.91 -12.91 2.0 -7.6
Pnu_g27406 (GSTU21)
-2.22 -1.99 1.71 -1.89
Pnu_g27455 (UNE14)
-4.11 -6.05 1.89 -2.22
-8.96 -11.09 2.0 -9.14
-4.09 - 1.96 -4.74
-2.95 - 1.95 -
-2.89 -3.17 1.86 -3.15
- - 2.0 -
- -2.96 1.95 -
-2.79 - 1.95 -
Pnu_g28084 (AAP3)
- - 1.98 -4.19
Pnu_g28172 (TDT)
-1.86 -2.37 1.78 -3.44
-8.09 -5.39 1.96 -3.57
- - 2.0 -
Pnu_g28230 (INT2)
-3.46 -6.54 1.96 -5.72
Pnu_g28319 (3BETAHSD/D2)
-1.86 -1.45 1.63 -1.97
-2.21 - 1.88 -3.18
-4.39 -2.96 1.69 -0.74
-2.01 -3.18 1.83 -3.72
Pnu_g30866 (CSLC5)
-6.23 -3.63 1.94 -3.74
-3.59 -4.79 1.94 -4.96
-2.24 -2.52 1.74 -1.82
-3.28 -5.68 1.94 -5.12
-2.89 -2.86 1.85 -3.1
-0.9 -0.98 1.25 -0.78
Pnu_g32244 (MFDX2)
-0.15 -0.17 0.41 -0.18
Pnu_g32463 (BGLU42)
-9.08 - 2.0 -11.62
-0.95 -1.45 1.52 -1.96
Pnu_g32749 (NINJA)
-1.91 -1.43 1.65 -2.19
-2.37 -2.51 1.75 -1.92

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.