1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g25861

Pnu_g25861 (MSL6)


Aliases : MSL6

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g25861

Target Alias Description ECC score Gene Family Method Actions
AT5G12080 MSL10, ATMSL10 mechanosensitive channel of small conductance-like 10 0.03 OrthoFinder output from all 47 species
Ceric.02G100400.1 MSL5, Ceric.02G100400 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Cre13.g591100 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.01 OrthoFinder output from all 47 species
GSVIVT01015113001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.01 OrthoFinder output from all 47 species
LOC_Os04g47320.1 MSL5, LOC_Os04g47320 mechanosensitive ion channel (MSL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 770 974
No external refs found!