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Description : not classified & original description: none
Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g23849 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00030870 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00068p00158450 | PDF1,... | Protodermal factor 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00858p00001360 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT2G42840 | PDF1 | protodermal factor 1 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g010045 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00397 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g09555 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24247 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18021 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene06254.t1 | Aspi01Gene06254 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18607.t1 | Aspi01Gene18607 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene28876.t1 | Aspi01Gene28876 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene41347.t1 | Aspi01Gene41347 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene54373.t1 | Aspi01Gene54373 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene56111.t1 | Aspi01Gene56111 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0013.g013184 | No alias | not classified & original description: CDS=1-771 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G093300.1 | Ceric.03G093300 | not classified & original description: pacid=50573210... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G029600.1 | Ceric.09G029600 | not classified & original description: pacid=50588127... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G030000.1 | Ceric.09G030000 | not classified & original description: pacid=50587904... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G030100.1 | Ceric.09G030100 | not classified & original description: pacid=50587319... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G030400.1 | Ceric.09G030400 | not classified & original description: pacid=50588245... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G031000.1 | Ceric.09G031000 | not classified & original description: pacid=50588455... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G022300.1 | Ceric.13G022300 | not classified & original description: pacid=50635736... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g07203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35615 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00550 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g13225 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13694 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15103 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00869 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_40194 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g10490.1 | LOC_Os01g10490 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g13660.1 | LOC_Os02g13660 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g35970.1 | LOC_Os06g35970 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g55644 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g03900.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Mp3g10620.1 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g22090.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11807 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29044 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g44797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23508 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g26533 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c3_2630V3.1 | Pp3c3_2630 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g57949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010928 | No alias | not classified & original description: CDS=1-1425 | 0.03 | OrthoFinder output from all 47 species | |
| Smo437656 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g011010.2.1 | PDF1, Solyc12g011010 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g51109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45104 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e014410_P001 | PDF1, Zm00001e014410 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016528_P003 | Zm00001e016528 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019923_P004 | PDF1, Zm00001e019923 | Protodermal factor 1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030674_P001 | Zm00001e030674 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030749_P002 | Zm00001e030749 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |