Pnu_g21944


Description : not classified & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g21944
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270580 AT-HSFA6B,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AT2G41690 AT-HSFB3, HSFB3 heat shock transcription factor B3 0.03 OrthoFinder output from all 47 species
AT4G18870 No alias E2F/DP family winged-helix DNA-binding domain 0.02 OrthoFinder output from all 47 species
AT5G54070 AT-HSFA9, HSFA9 heat shock transcription factor A9 0.03 OrthoFinder output from all 47 species
Aspi01Gene03227.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69372.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012606 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: CDS=1-1191 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029782 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: CDS=1-921 0.03 OrthoFinder output from all 47 species
Ceric.05G086000.1 ATHSF1, HSF1,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G074700.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.22G003800.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G078200.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g19941 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05680 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018041001 AT-HSFA6B, HSFA6B RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Gb_14573 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os01g39020.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
LOC_Os02g13800.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
LOC_Os09g28200.1 HSFB4, SCZ,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Len_g28547 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31020 AT-HSFB2A, HSFB2A HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38313 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_113508g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
MA_8812600g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
MA_9434330g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Mp4g12230.1 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Msp_g47116 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14719 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27452 AT-HSFA5, HSFA5 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05097 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08209 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48573 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53549 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60061 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026285 ATHSF1, HSF1,... HSF-type transcription factor & original description: CDS=1-2472 0.04 OrthoFinder output from all 47 species
Sam_g14010 No alias HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo93081 ATHSFA1D, HSFA1D RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc03g026020.3.1 AT-HSFB2A,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc07g040680.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Solyc09g082670.3.1 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc12g007070.2.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Spa_g48007 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50799 No alias HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001765_P002 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Zm00001e032930_P002 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!