1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g20438

Pnu_g20438 (ATMYA1, XI-1, MYA1)


Aliases : ATMYA1, XI-1, MYA1

Description : not classified & original description: none


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20438

Target Alias Description ECC score Gene Family Method Actions
Als_g13947 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Ceric.03G015200.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000189.32 ATVIIIA, VIIIA Myosin-7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g15523 ATVIIIA, VIIIA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17314 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028990001 XI-8, XI-B, XIB, ATXIB Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
LOC_Os10g25565.1 XI-15, ATXI-I,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
MA_20378g0010 XIC, ATXIC class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Mp8g04010.1 ATXIK, XI-17, XIK C3H zinc finger transcription factor. class XI myosin... 0.02 OrthoFinder output from all 47 species
Solyc09g064200.4.1 XI-6, ATMYA2,... class XI myosin microfilament-based motor protein 0.04 OrthoFinder output from all 47 species
Zm00001e012044_P001 XIF, ATMYO5,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e036098_P002 ATXIE, XIE,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 109 128
IPR000048 IQ_motif_EF-hand-BS 14 32
IPR000048 IQ_motif_EF-hand-BS 84 103
IPR000048 IQ_motif_EF-hand-BS 36 56
IPR000048 IQ_motif_EF-hand-BS 62 81
No external refs found!