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  5. Pnu_g20098

Pnu_g20098 (ATPPC3, PPC3)


Aliases : ATPPC3, PPC3

Description : not classified & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20098

Target Alias Description ECC score Gene Family Method Actions
Cre03.g171950 ATPPC4, PPC4 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Ehy_g04041 ATPPC4, PPC4 PEP carboxylase *(PPC) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g14770.1 PPC2, ATPPC2,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Ore_g26762 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g062530.3.1 ATPPC3, PPC3,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Solyc10g007290.4.1 ATPPC3, PPC3,... PEP carboxylase 0.03 OrthoFinder output from all 47 species
Spa_g17165 ATPPC3, PPC3 PEP carboxylase *(PPC) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 11 191
No external refs found!