1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g20038

Pnu_g20038


Description : not classified & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20038

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00019880 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00099p00101040 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00099p00101950 evm_27.TU.AmTr_v1... Probable carboxylesterase 18 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00041000 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT3G05120 ATGID1A, GID1A alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g43868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07190 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15753 ATGID1C, GID1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24858 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31039 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40337.t1 CXE17, AtCXE17,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25765 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78559 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z084300.1 CXE17, AtCXE17,... not classified & original description: pacid=50637264... 0.03 OrthoFinder output from all 47 species
Ceric.36G031400.1 Ceric.36G031400 not classified & original description: pacid=50568384... 0.03 OrthoFinder output from all 47 species
Ceric.36G031500.1 CXE17, AtCXE17,... not classified & original description: pacid=50568436... 0.03 OrthoFinder output from all 47 species
Ceric.36G031700.1 CXE17, AtCXE17,... not classified & original description: pacid=50568868... 0.03 OrthoFinder output from all 47 species
Ceric.36G041200.1 CXE17, AtCXE17,... not classified & original description: pacid=50568278... 0.03 OrthoFinder output from all 47 species
Dcu_g05457 AtCXE18, CXE18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009528001 No alias Probable carboxylesterase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031769001 ATCXE12, CXE12 Probable carboxylesterase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031770001 AtCXE5, CXE5 Probable carboxylesterase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031772001 ATCXE12, CXE12 Probable carboxylesterase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035846001 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035848001 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_19416 No alias Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_39264 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g15270.1 CXE17, AtCXE17,... Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g34280.1 LOC_Os07g34280 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.02 OrthoFinder output from all 47 species
LOC_Os07g41590.1 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28690.1 LOC_Os09g28690 Tuliposide A-converting enzyme 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g07250 AtCXE18, CXE18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_304461g0010 No alias Probable carboxylesterase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_9698361g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g20050.1 ATGID1C, GID1C Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g03560.1 ATGID1C, GID1C Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g11710.1 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g06780.1 AtCXE18, CXE18 Carboxylesterase 1 OS=Actinidia eriantha... 0.02 OrthoFinder output from all 47 species
Msp_g10582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35036 CXE20, AtCXE20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41910 ATCXE12, CXE12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45422 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo138855 CXE20, AtCXE20 Carboxylesterase 1 OS=Actinidia eriantha 0.04 OrthoFinder output from all 47 species
Solyc01g094010.3.1 Solyc01g094010 Probable carboxylesterase 8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g098140.4.1 CXE20, AtCXE20,... Carboxylesterase 1 OS=Actinidia eriantha... 0.04 OrthoFinder output from all 47 species
Solyc01g098390.3.1 ATGID1C, GID1C,... GID1-type gibberellin receptor 0.02 OrthoFinder output from all 47 species
Solyc06g054300.1.1 ATCXE12, CXE12,... 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.04 OrthoFinder output from all 47 species
Solyc09g075680.1.1 ATCXE12, CXE12,... 2-hydroxyisoflavanone dehydratase OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Solyc10g050880.2.1 ATCXE12, CXE12,... Probable carboxylesterase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g056674.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g056675.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g056678.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g150125.1.1 CXE20, AtCXE20,... Probable carboxylesterase 120 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Tin_g33623 CXE13, ATCXE13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032867_P001 Zm00001e032867 Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035702_P001 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035706_P001 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e038541_P001 CXE17, AtCXE17,... Probable carboxylesterase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 78 302
No external refs found!