Pnu_g19896


Description : not classified & original description: none


Gene families : OG0001797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001797_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19896

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00245460 evm_27.TU.AmTr_v1... Protein TSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g15019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54902.t1 Aspi01Gene54902 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56297.t1 Aspi01Gene56297 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04071 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g19382 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01023693001 No alias Protein TSS OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01023694001 No alias Protein TSS OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_14168 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55230.1 LOC_Os04g55230 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.03 OrthoFinder output from all 47 species
LOC_Os07g23990.1 LOC_Os07g23990 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Lfl_g03522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433171g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.05 OrthoFinder output from all 47 species
MA_10436966g0010 No alias Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath : 111.0) 0.05 OrthoFinder output from all 47 species
Msp_g31543 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25092 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g14901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56916 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11582 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo10032 No alias Protein TSS OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc07g006030.4.1 Solyc07g006030 Protein TSS OS=Arabidopsis thaliana (sp|f4jkh6|tss_arath... 0.02 OrthoFinder output from all 47 species
Spa_g02169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033646 CLU-central 82 169
IPR033646 CLU-central 175 223
No external refs found!