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  5. Pnu_g19068

Pnu_g19068


Description : not classified & original description: none


Gene families : OG0000611 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g19068
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Adi_g082838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g054970.3.1 Solyc05g054970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g091560.3.1 Solyc09g091560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g03451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021832 ANKRD13 189 643
IPR002110 Ankyrin_rpt 73 113
No external refs found!