1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g18415

Pnu_g18415


Description : hydroxyproline O-galactosyltransferase *(GALT) & original description: none


Gene families : OG0000727 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000727_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18415
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT1G26810 GALT1 galactosyltransferase1 0.02 OrthoFinder output from all 47 species
Aev_g18991 GALT1 hydroxyproline O-galactosyltransferase *(GALT) &... 0.05 OrthoFinder output from all 47 species
Ceric.28G063000.1 Ceric.28G063000 hydroxyproline O-galactosyltransferase *(GALT) &... 0.02 OrthoFinder output from all 47 species
Dcu_g34486 GALT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011424001 GALT1 Protein modification.N-linked glycosylation.complex... 0.03 OrthoFinder output from all 47 species
LOC_Os02g36770.1 GALT1, LOC_Os02g36770 beta-1,3-galactosyltransferase 0.01 OrthoFinder output from all 47 species
Pir_g01989 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03931 GALT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11813 No alias hydroxyproline O-galactosyltransferase *(GALT) &... 0.03 OrthoFinder output from all 47 species
Zm00001e011406_P001 Zm00001e011406 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.03 OrthoFinder output from all 47 species
Zm00001e018130_P001 Zm00001e018130 hydroxyproline-O-galactosyltransferase (GALT). AGP... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002659 Glyco_trans_31 470 628
IPR001079 Galectin_CRD 218 422
No external refs found!