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  5. Pnu_g18304

Pnu_g18304 (EXGT-A2, XTH28, XTR2, ATXTH28)


Aliases : EXGT-A2, XTH28, XTR2, ATXTH28

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g18304
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Adi_g025635 XTH27, ATXTH27, EXGT-A3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05803 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g46910.1 XTR4, XTH30,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
LOC_Os09g23220.1 EXGT-A2, XTH28,... Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
Len_g21376 XTH27, ATXTH27, EXGT-A3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41456 XTH27, ATXTH27, EXGT-A3 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000070_P001 XTH32, Zm00001e000070 xyloglucan endotransglucosylase/hydrolase 0.02 OrthoFinder output from all 47 species
Zm00001e015512_P001 XTR4, XTH30,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR010713 XET_C 283 318
IPR000757 GH16 58 239
No external refs found!