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  5. Pnu_g17808

Pnu_g17808


Description : not classified & original description: none


Gene families : OG0001314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g17808
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266980 evm_27.TU.AmTr_v1... CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Aspi01Gene18216.t1 Aspi01Gene18216 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53539.t1 Aspi01Gene53539 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.38G025000.1 Ceric.38G025000 not classified & original description: pacid=50579682... 0.03 OrthoFinder output from all 47 species
Dcu_g26567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g42640.1 LOC_Os02g42640 CBS domain-containing protein CBSX5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os10g35630.1 LOC_Os10g35630 CBS domain-containing protein CBSX5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_20447g0010 No alias CBS domain-containing protein CBSX5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017248 No alias not classified & original description: CDS=43-1452 0.03 OrthoFinder output from all 47 species
Zm00001e004461_P002 Zm00001e004461 CBS domain-containing protein CBSX5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e015227_P001 Zm00001e015227 CBS domain-containing protein CBSX5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 397 443
No external refs found!