1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g58256

Als_g58256


Description : splicing factor *(PRP38) & original description: none


Gene families : OG0004863 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004863_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g58256

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g01630.1 LOC_Os09g01630 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g12850.1 No alias Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g07486 No alias splicing factor *(PRP38) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16477 No alias splicing factor *(PRP38) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100060.4.1 Solyc01g100060 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g15678 No alias splicing factor *(PRP38) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54111 No alias splicing factor *(PRP38) & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e009450_P001 Zm00001e009450 Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 11 186
No external refs found!