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  5. Als_g49979

Als_g49979


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g49979

Target Alias Description ECC score Gene Family Method Actions
Aev_g48359 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25412 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05694.t1 Aspi01Gene05694 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.06 OrthoFinder output from all 47 species
Len_g39133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.04 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.05 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0032048 cardiolipin metabolic process IEP HCCA
BP GO:0032049 cardiolipin biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 4 36
IPR002885 Pentatricopeptide_repeat 43 92
IPR002885 Pentatricopeptide_repeat 116 140
No external refs found!