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  5. Als_g48908

Als_g48908 (SGA01, ASF1B, SGA1)


Aliases : SGA01, ASF1B, SGA1

Description : histone chaperone *(ASF1) & original description: none


Gene families : OG0002598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g48908
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Ala_g26671 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13741 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g17724 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene56580.t1 SGA01, ASF1B,... histone chaperone *(ASF1) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene56581.t1 SGA01, ASF1B,... histone chaperone *(ASF1) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011484 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: CDS=367-1149 0.02 OrthoFinder output from all 47 species
Ceric.31G010700.1 SGA2, SP7,... histone chaperone *(ASF1) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.65 SGA01, ASF1B, SGA1 Chromatin organisation.histone chaperone... 0.02 OrthoFinder output from all 47 species
Dac_g02033 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.07 OrthoFinder output from all 47 species
Len_g09240 SGA01, ASF1B, SGA1 histone chaperone *(ASF1) & original description: none 0.06 OrthoFinder output from all 47 species
MA_16730g0010 SGA2, SP7, AtSP7, ASF1A histone chaperone (ASF1) 0.04 OrthoFinder output from all 47 species
MA_73031g0010 SGA01, ASF1B, SGA1 histone chaperone (ASF1) 0.03 OrthoFinder output from all 47 species
Msp_g48948 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05142 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000629 SGA01, ASF1B, SGA1 histone chaperone *(ASF1) & original description: CDS=1-828 0.04 OrthoFinder output from all 47 species
Sam_g25839 No alias histone chaperone *(ASF1) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11646 SGA2, SP7, AtSP7, ASF1A histone chaperone *(ASF1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e026466_P001 SGA01, ASF1B,... histone chaperone (ASF1) 0.02 OrthoFinder output from all 47 species
Zm00001e032349_P001 SGA01, ASF1B,... histone chaperone (ASF1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006325 chromatin organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006818 ASF1-like 44 197
No external refs found!