Heatmap: Cluster_11 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Sterile Leaflet
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Root
- - - - - 2.81 -
- - - - - 2.8 -5.83
-3.41 - - - - 2.77 -4.0
- - - - - 2.81 -
-3.36 -3.0 - - - 2.75 -3.95
- -5.75 - - - 2.8 -
-7.06 -4.34 - - -6.73 2.72 -1.53
Als_g00644 (WRKY71)
-4.21 -1.83 - -2.56 - 2.7 -6.31
Als_g00648 (RLP57)
- -5.58 -3.91 -4.84 -4.01 2.63 -0.68
- -3.76 - - - 2.79 -5.63
Als_g01038 (YRE)
- -7.21 - - - 2.8 -5.29
Als_g01075 (MCM5)
-5.88 -5.42 -2.59 -3.96 -2.39 2.52 -0.33
- - - - - 2.81 -
- - - - - 2.75 -1.92
- - - - - 2.79 -3.72
-4.99 -2.9 - - - 2.77 -5.55
- - - - - 2.8 -4.14
Als_g01667 (CYCD1;1)
-8.39 - - - - 2.77 -2.64
- - - - - 2.77 -2.54
Als_g01863 (PAO5)
-7.46 -6.34 -9.59 -8.36 - 2.76 -2.39
Als_g01904 (IMK2)
- -10.22 - -10.44 - 2.77 -2.36
Als_g01972 (EXS)
-4.58 -4.79 -3.18 -2.76 -7.88 2.63 -1.11
- - - - - 2.71 -1.18
- - - - - 2.81 -
- -8.35 - - - 2.8 -5.41
-2.53 -3.42 -5.93 -4.83 -5.77 2.58 -0.58
- - - - - 2.81 -
- - - - - 2.64 -0.42
- -6.56 -4.71 -4.82 -5.72 2.74 -2.33
- - - - - 2.81 -
-5.3 -3.45 -2.57 -1.87 -2.12 2.58 -2.19
-5.29 -6.2 -3.27 -2.76 -4.83 2.7 -2.56
-6.89 -9.38 - -7.09 - 2.69 -0.87
Als_g03090 (FMA)
-7.59 -5.91 - -6.96 - 2.72 -1.47
- - - -3.03 - 2.72 -1.82
- - - -4.0 - 2.7 -1.16
-3.62 -4.4 - -5.29 -3.9 2.75 -3.88
- - - - - 2.72 -1.32
-2.41 -2.47 - -5.19 - 2.72 -
-3.13 -2.06 - - - 2.7 -2.58
Als_g03771 (LRX2)
- -5.66 -4.52 -5.01 -4.91 2.71 -1.62
- - - - - 2.81 -
-1.4 -0.9 -4.86 - - 2.53 -1.85
- -5.19 - -5.51 -5.32 2.73 -1.85
- -5.15 - - - 2.77 -2.84
-9.25 -8.89 - -9.1 -6.95 2.76 -2.13
- -3.73 - - - 2.79 -5.71
-4.61 - -4.43 - - 2.79 -
- - - - - 2.81 -
- - - - - 2.81 -
- - - - - 2.7 -0.97
-2.57 - -2.85 -1.65 -3.1 2.59 -2.17
- -6.67 -4.99 -5.81 - 2.76 -2.79
-5.04 - - - - 2.79 -4.87
Als_g04777 (WRKY21)
-3.51 -2.41 -1.88 -1.47 -2.7 2.46 -1.21
- - -4.3 -6.66 -5.47 2.66 -0.73
- - - - - 2.81 -
Als_g04915 (KAN)
- - - - - 2.79 -3.37
-3.99 -3.56 -3.07 -3.18 -3.8 2.56 -0.58
-1.98 -2.28 -1.14 -1.06 -1.38 2.22 -0.8
-2.83 -2.16 -2.4 -2.66 -3.03 2.58 -2.29
Als_g05373 (MCM6)
-5.63 -6.16 -6.09 -6.27 -4.05 2.64 -0.59
Als_g05518 (SSI2)
- -6.22 - -7.99 -6.02 2.8 -
-3.37 -4.36 -6.89 -2.75 -7.21 2.58 -0.45
Als_g05720 (PDF2)
- -6.73 - - - 2.8 -5.91
Als_g05721 (RBOHF)
-4.49 -7.72 - - - 2.77 -3.23
- -6.94 - - - 2.8 -6.92
-3.72 -5.82 -2.92 -4.02 -3.71 2.64 -1.27
Als_g06231 (RBOHF)
-4.17 -3.61 - - - 2.77 -4.1
Als_g06345 (DSO)
-1.74 -1.72 - - - 2.65 -3.25
Als_g06769 (MCM6)
- -4.2 - -4.56 -5.29 2.67 -0.98
- - - - - 2.72 -1.36
-4.07 - - - - 2.79 -4.43
- - - -5.42 - 2.8 -
Als_g06966 (MCM4)
-6.39 - -6.74 - - 2.68 -0.86
- - - - - 2.8 -4.38
- -5.76 - - -5.52 2.8 -
Als_g07041 (TET8)
- - - - - 2.68 -0.79
-2.7 -2.96 -4.36 -3.35 -5.04 2.69 -3.53
Als_g07199 (PDF2)
- - - - - 2.81 -
-2.79 -2.5 -3.66 -2.24 - 2.64 -2.73
- -9.67 -8.38 -8.98 -8.6 2.71 -1.13
- -6.43 - - - 2.8 -5.52
Als_g07824 (MCM4)
-5.51 - -5.96 - -5.45 2.66 -0.69
- - - - - 2.68 -0.71
-6.97 -6.02 - -6.33 -5.72 2.79 -7.56
Als_g08117 (ENODL14)
- -3.79 - - - 2.79 -
-7.04 -6.74 -1.09 -1.59 -2.28 2.55 -3.16
- - - - - 2.81 -
-4.47 -4.31 -3.04 -3.95 -2.94 2.59 -0.84
Als_g08328 (RBOHF)
-7.81 -7.44 - -8.65 - 2.8 -4.81
Als_g08813 (SHT)
- -4.71 - - - 2.71 -1.31
- -25.53 - - - 2.8 -5.29
- -3.94 - - - 2.79 -4.82
-12.26 -7.29 - - - 2.8 -6.29
-2.42 -3.46 -1.94 -0.9 -3.68 2.49 -2.05
Als_g09330 (TMK1)
-3.01 -2.44 -3.98 -3.72 -4.33 2.62 -1.57
- - - - - 2.74 -1.67
-7.99 -7.41 -7.54 -8.0 -7.52 2.8 -5.62
- -5.26 -3.19 -2.84 -3.1 2.66 -1.88
- - - - - 2.81 -
-4.25 -4.64 -2.72 -2.1 -4.2 2.66 -2.64
-3.7 - - - - 2.69 -1.08
Als_g10136 (GRF2)
-1.86 -2.64 -7.19 -7.59 - 2.71 -6.89
- - - - - 2.81 -
-3.45 -2.69 -1.52 -2.45 -2.8 2.53 -1.73
Als_g11026 (XTH7)
- -9.87 -8.97 - -11.27 2.8 -6.1
Als_g11080 (RALFL24)
- - - - - 2.81 -
- -7.31 - - - 2.8 -7.12
Als_g11185 (MEF18)
- - - - - 2.78 -3.1
- -3.18 -5.83 -5.66 -4.27 2.67 -1.18
- - - - - 2.81 -
- - - - - 2.71 -1.11
-10.2 -6.92 -11.6 - -8.81 2.78 -2.86
- - -8.11 - - 2.73 -1.5
-3.2 - - - -3.07 2.76 -
- - - - - 2.73 -1.43
-6.12 -5.43 -4.05 -4.77 -4.36 2.76 -4.11
- - - - - 2.78 -3.2
Als_g12831 (CIB1)
-4.56 - - - - 2.79 -4.18
Als_g12904 (SWEET7)
- - -9.69 - -7.13 2.81 -10.63
- - - -7.69 - 2.76 -2.2
- -6.68 - - -6.67 2.77 -2.84
Als_g13503 (MYB50)
-2.63 -2.77 - -7.71 - 2.74 -6.59
- - - - - 2.81 -
Als_g13520 (GRF2)
- -9.98 - - - 2.8 -5.6
-8.53 -8.3 - - - 2.78 -3.18
-3.97 -6.64 - - -8.29 2.79 -5.5
-3.38 -5.76 -9.68 -9.86 -9.75 2.77 -3.6
- - - - - 2.8 -5.73
- -8.86 -9.57 - - 2.81 -
- - - - - 2.78 -2.95
- - - - - 2.81 -
Als_g14091 (PGP4)
-4.14 -3.85 -5.42 -4.11 -4.45 2.72 -2.48
Als_g14092 (PGP21)
-3.63 -4.1 -4.81 -4.33 -6.84 2.74 -3.42
- - -5.06 - -5.0 2.75 -2.22
-9.01 -8.7 -10.41 -8.92 - 2.79 -3.66
-4.59 - - - - 2.72 -1.46
- - - -3.45 - 2.79 -
- - - - - 2.81 -
-8.25 -7.24 - -10.19 - 2.73 -1.5
Als_g14990 (BAM1)
-3.45 -7.27 -4.56 -7.33 -4.03 2.69 -1.62
Als_g15131 (KCS11)
-8.2 -6.26 - -10.05 - 2.79 -4.27
- - - - - 2.81 -8.42
- -7.19 - - - 2.8 -5.96
Als_g15504 (EXS)
-3.81 -3.36 -10.11 -6.72 - 2.73 -2.26
Als_g15588 (SHL)
- -6.53 - - - 2.78 -3.27
- - - - - 2.81 -
Als_g15684 (DSO)
- -7.71 - - - 2.79 -3.33
Als_g15721 (LOF2)
-3.46 -1.91 - -3.3 - 2.71 -5.93
-6.13 -5.87 - - - 2.64 -0.45
- - - - - 2.81 -
-3.22 -3.82 -2.93 -3.66 -2.71 2.61 -1.52
- -6.04 -8.48 - - 2.69 -0.89
- - -3.52 - - 2.79 -
- - - - - 2.79 -3.43
- -7.61 -6.05 - -4.23 2.79 -5.64
- -7.24 - - - 2.71 -1.14
-3.02 -3.96 -2.67 -2.67 -2.82 2.67 -
-3.33 -1.95 -4.78 -4.23 - 2.61 -1.13
Als_g22887 (ERL1)
-4.48 -5.89 -4.79 -5.34 -6.01 2.72 -1.9
- - -4.74 -7.48 -2.31 2.76 -8.23
- - -2.01 -2.88 - 2.73 -
Als_g33540 (MAP65-1)
-5.68 -6.1 -3.5 -3.7 -5.94 2.65 -0.95
-2.65 -3.01 -2.56 -2.0 -2.82 2.55 -1.78
Als_g33931 (MCM4)
-6.21 - -4.75 -7.13 -5.52 2.67 -0.87
- - -6.97 - -6.53 2.79 -4.57
- -6.3 - - - 2.76 -2.13
Als_g40658 (KATC)
-0.7 -2.08 -2.44 -2.06 -3.15 2.34 -0.88
-6.08 - -5.47 - - 2.72 -1.4
Als_g42144 (CAT6)
- - - -7.57 - 2.66 -0.61
- -6.94 - - - 2.8 -5.54
- - - - - 2.72 -1.36
- -5.07 -5.64 -6.28 -6.51 2.74 -2.06
Als_g47557 (CHAL)
- - - - - 2.73 -1.53
- -4.77 - -7.56 -6.19 2.66 -0.66
-9.55 -6.08 - -9.84 -8.55 2.8 -5.86
Als_g48908 (SGA1)
-3.12 -5.83 -5.26 -5.05 - 2.63 -0.66
-4.03 - - - - 2.77 -3.01
- - - - - 2.78 -2.98
- -2.66 - -5.0 - 2.7 -1.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.