Als_g48111 (WRKY42, AtWRKY42)

Aliases : WRKY42, AtWRKY42

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g48111

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.02	OrthoFinder output from all 47 species
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.02	OrthoFinder output from all 47 species
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.02	OrthoFinder output from all 47 species
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.02	OrthoFinder output from all 47 species
Adi_g039781	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g061046	WRKY9, ATWRKY9	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g112197	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117328	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20332	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g48769	No alias	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Als_g50608	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g30328	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g27046	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65370.t1	WRKY75,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g68331	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.14G044100.1	ATWRKY25,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01008046001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01034968001	WRKY48, ATWRKY48	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01035884001	WRKY18, ATWRKY18	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_23334	WRKY31, ATWRKY31	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_26412	WRKY28, ATWRKY28	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g50610.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os06g44010.1	WRKY18,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os12g32250.1	WRKY3, LOC_Os12g32250	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_10425932g0020	WRKY75, ATWRKY75	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_10428091g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
MA_175750g0010	WRKY9, ATWRKY9	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_4321850g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g08798	WRKY31, ATWRKY31	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01131	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g34132	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20318	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g26717	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g089960.3.1	Solyc01g089960	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc02g067430.3.1	WRKY72,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc03g116890.3.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g055750.3.1	MSP3, ATWRKY34,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g03864	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g25948	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26702	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e004183_P001	AtWRKY41,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e029445_P001	WRKY3, Zm00001e029445	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e031901_P001	WRKY33,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e034487_P001	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e036514_P001	WRKY72,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	385	442

External Links

No external refs found!

Als_g48111 (WRKY42, AtWRKY42)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation