Als_g46856 (RAB1C, ATRAB1C, ATRABD2C)

Aliases : RAB1C, ATRAB1C, ATRABD2C

Description : not classified & original description: none

Gene families : OG0004144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004144_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g46856
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
Adi_g088597	ARAC9, ATROP8, ROP8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g44864	RABF2B,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g28064	ATRABE1D,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g08033	ATRABB1B,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g20261	ATRABE1C,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g20459	ATRAB18,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g20489	ATRAB18,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g36141	ATRAB18,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g37368	RAN1, RAN-1, ATRAN1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g42384	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	169

External Links

No external refs found!