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  5. Als_g43580

Als_g43580


Description : assembly factor (eIF1) of eIF1 & original description: none


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g43580
Cluster HCCA: Cluster_432

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266770 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Ala_g00314 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04083 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47733 No alias assembly factor (eIF1) of eIF1 & original description: none 0.06 OrthoFinder output from all 47 species
Als_g48173 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07516 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26057 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67771.t1 Aspi01Gene67771 assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67773.t1 Aspi01Gene67773 assembly factor (eIF1) of eIF1 & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29211 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31417 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g40202 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g11955 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28226 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31840 No alias assembly factor (eIF1) of eIF1 0.01 OrthoFinder output from all 47 species
LOC_Os05g41900.1 LOC_Os05g41900 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
Lfl_g06395 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20659 No alias assembly factor (eIF1) of eIF1 & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g25397 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10279 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22822 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27668 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11927 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15186 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06786 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023202 No alias assembly factor (eIF1) of eIF1 & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g51525 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064150.4.1 Solyc07g064150 assembly factor (eIF1) of eIF1 0.06 OrthoFinder output from all 47 species
Spa_g02983 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10696 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10697 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22324 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34342 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 62 109
No external refs found!