Als_g38552

Description : component *(uS5) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g38552

Target	Alias	Description	ECC score	Gene Family Method
Adi_g075067	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Azfi_s0110.g045473	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Dac_g05646	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Dde_g07415	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Gb_04606	No alias	component RPS2 of SSU proteome	0.02	OrthoFinder output from all 47 species
Lfl_g25707	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
MA_158470g0010	No alias	component RPS2 of SSU proteome	0.01	OrthoFinder output from all 47 species
Nbi_g03400	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Pir_g11571	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Sam_g08630	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Tin_g04436	No alias	component *(uS5) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
MF	GO:0008073	ornithine decarboxylase inhibitor activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
MF	GO:0042979	ornithine decarboxylase regulator activity	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013810	Ribosomal_S5_N	83	147
IPR005324	Ribosomal_S5_C	167	239

External Links

No external refs found!

Als_g38552

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation