Aliases : CHMP1A, VPS46.2
Description : associated protein of ESCRT-III complex *(VPS46/CHMP1) & original description: none
Gene families : OG0001221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001221_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Als_g38525 | |
Cluster | HCCA: Cluster_129 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g110995 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene08996.t1 | CHMP1A, VPS46.2,... | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0006.g009683 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020554.72 | CHMP1B, VPS46.1 | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.02 | OrthoFinder output from all 47 species | |
Gb_40149 | CHMP1B, VPS46.1 | VPS46/CHMP1 associated protein of ESCRT-III complex | 0.02 | OrthoFinder output from all 47 species | |
Len_g10600 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.04 | OrthoFinder output from all 47 species | |
Mp5g17770.1 | CHMP1B, VPS46.1 | VPS46/CHMP1 associated protein of ESCRT-III complex | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g05689 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g16522 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g121360.1.1 | CHMP1B, VPS46.1,... | VPS46/CHMP1 associated protein of ESCRT-III complex | 0.02 | OrthoFinder output from all 47 species | |
Spa_g08488 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g08489 | CHMP1A, VPS46.2 | associated protein of ESCRT-III complex *(VPS46/CHMP1) &... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007034 | vacuolar transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003839 | gamma-glutamylcyclotransferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
BP | GO:0006749 | glutathione metabolic process | IEP | HCCA |
BP | GO:0006751 | glutathione catabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
MF | GO:0016842 | amidine-lyase activity | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | HCCA |
BP | GO:0043171 | peptide catabolic process | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044273 | sulfur compound catabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005024 | Snf7_fam | 15 | 176 |
No external refs found! |