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  5. Als_g37045

Als_g37045


Description : cutin and suberin biosynthesis transcription factor *(SHN) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g37045
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00064760 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Aev_g25772 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g05033 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10580 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g11527 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g22160 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aob_g32316 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.04 OrthoFinder output from all 47 species
Aspi01Gene05660.t1 Aspi01Gene05660 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32075.t1 DREB26, Aspi01Gene32075 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65343.t1 Aspi01Gene65343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70904.t1 Aspi01Gene70904 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26067 ATERF3, ERF3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g32790.1 LEP, LOC_Os04g32790 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os05g28350.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Len_g15213 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_18403g0020 No alias Ethylene-responsive transcription factor RAP2-4... 0.03 OrthoFinder output from all 47 species
MA_6677438g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_904750g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_9588449g0010 ERF1, ATERF1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g00546 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24161 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26909 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25028 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37613 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008166 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g16486 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036130_P001 RAP2.4, Zm00001e036130 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 55
No external refs found!