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  5. Als_g31352

Als_g31352


Description : not classified & original description: none


Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g31352

Target Alias Description ECC score Gene Family Method Actions
AT1G67210 No alias Proline-rich spliceosome-associated (PSP) family protein... 0.03 OrthoFinder output from all 47 species
Aob_g02041 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Aop_g13090 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044851 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Dcu_g19417 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Ehy_g05083 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Ehy_g12214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03270 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Ore_g23549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20212 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Tin_g11945 No alias component *(ZCCHC8) of Nuclear Exosome TargeTing (NEXT)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!