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  5. Als_g30864

Als_g30864


Description : not classified & original description: none


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g30864
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Aob_g10868 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010827 No alias not classified & original description: CDS=839-3871 0.03 OrthoFinder output from all 47 species
Cba_g07761 No alias regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ceric.14G063400.1 Ceric.14G063400 not classified & original description: pacid=50633761... 0.03 OrthoFinder output from all 47 species
Dac_g03416 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dcu_g04106 No alias regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
MA_10425785g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_715866g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g005630.3.1 Solyc03g005630 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e007224_P001 Zm00001e007224 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!