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  5. Als_g28455

Als_g28455 (YSL6)


Aliases : YSL6

Description : ferric cation-chelator transporter *(YSL) & original description: none


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g28455

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00090040 YSL7,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00154p00064240 YSL6,... Probable metal-nicotianamine transporter YSL6... 0.02 OrthoFinder output from all 47 species
AT3G17650 YSL5, PDE321 YELLOW STRIPE like 5 0.02 OrthoFinder output from all 47 species
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.02 OrthoFinder output from all 47 species
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.01 OrthoFinder output from all 47 species
Adi_g044334 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03904.t1 YSL6, Aspi01Gene03904 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene55143.t1 YSL6, Aspi01Gene55143 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g16934 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
GSVIVT01012036001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.01 OrthoFinder output from all 47 species
Gb_39396 ATYSL3, YSL3 iron chelator transporter (YSL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g42220.1 YSL7, LOC_Os02g42220 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g44320.1 YSL7, LOC_Os04g44320 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_110581g0010 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Mp4g01710.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Pp3c2_34990V3.1 YSL6, Pp3c2_34990 YELLOW STRIPE like 6 0.01 OrthoFinder output from all 47 species
Sam_g12425 No alias ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g06551 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g21975 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g26130 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007378_P004 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e008356_P001 YSL6, Zm00001e008356 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e031577_P001 ATYSL2, YSL2,... Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Zm00001e033936_P001 ATYSL2, YSL2,... Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 114 733
No external refs found!