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  5. Als_g27302

Als_g27302 (TMN1, AtTMN1)


Aliases : TMN1, AtTMN1

Description : not classified & original description: none


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g27302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00115620 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00070p00145350 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G08350 No alias Endomembrane protein 70 protein family 0.03 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.05 OrthoFinder output from all 47 species
AT1G14670 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
AT5G37310 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
Adi_g079622 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03467 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03806 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025094 No alias not classified & original description: CDS=143-1366 0.01 OrthoFinder output from all 47 species
Azfi_s0509.g074704 TMN1, AtTMN1 not classified & original description: CDS=1-1740 0.04 OrthoFinder output from all 47 species
Cba_g26284 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.06 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.06 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.15 No alias Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre16.g675958 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g07852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_02686 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_07212 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34690.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g13380.1 LOC_Os03g13380 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06470.1 LOC_Os08g06470 Transmembrane 9 superfamily member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g07910.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os12g07670.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Lfl_g05549 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g38915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_334563g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g02238 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g06433 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo163520 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo170330 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g103930.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g014570.3.1 Solyc04g014570 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g074310.4.1 Solyc06g074310 Transmembrane 9 superfamily member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g044480.2.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc11g011910.2.1 Solyc11g011910 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g022540.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g40885 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47696 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50972 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000978_P002 Zm00001e000978 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e014799_P002 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e038626_P002 Zm00001e038626 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039502_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 53 546
No external refs found!