Als_g23925

Description : regulatory protein *(SCAMP) of exocytic trafficking & original description: none

Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g23925

Target	Alias	Description	ECC score	Gene Family Method
Adi_g105603	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Als_g39134	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.01	OrthoFinder output from all 47 species
Cba_g00888	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.04	OrthoFinder output from all 47 species
Ceric.19G014100.1	Ceric.19G014100	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Cre02.g089900	No alias	Secretory carrier-associated membrane protein 5 OS=Oryza...	0.01	OrthoFinder output from all 47 species
Ehy_g06730	SC3	regulatory protein *(SCAMP) of exocytic trafficking &...	0.02	OrthoFinder output from all 47 species
LOC_Os05g42330.1	LOC_Os05g42330	Secretory carrier-associated membrane protein 3 OS=Oryza...	0.02	OrthoFinder output from all 47 species
LOC_Os08g06440.1	LOC_Os08g06440	Secretory carrier-associated membrane protein 6 OS=Oryza...	0.02	OrthoFinder output from all 47 species
Mp2g20380.1	SC3	Putative secretory carrier-associated membrane protein 1...	0.02	OrthoFinder output from all 47 species
Pir_g00864	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.04	OrthoFinder output from all 47 species
Pir_g12817	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Smo141352	No alias	Secretory carrier-associated membrane protein 1 OS=Oryza...	0.02	OrthoFinder output from all 47 species
Spa_g08939	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Tin_g00682	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007273	SCAMP	107	279

External Links

No external refs found!

Als_g23925

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation