Aliases : POK, TTD8, ATVPS52
Description : component *(VPS52/POK) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: none
Gene families : OG0004170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G71270 | POK, TTD8, ATVPS52 | Vps52 / Sac2 family | 0.05 | OrthoFinder output from all 47 species | |
Aob_g16191 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0293.g063465 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.05G039600.1 | POK, TTD8,... | component *(VPS52/POK) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
Cre08.g367200 | POK, TTD8, ATVPS52 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g01774 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.13 | OrthoFinder output from all 47 species | |
Dde_g09340 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g03868 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01012102001 | POK, TTD8, ATVPS52 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.06 | OrthoFinder output from all 47 species | |
Gb_30516 | POK, TTD8, ATVPS52 | component VPS52/POK of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g30460.1 | POK, TTD8,... | component VPS52/POK of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g03261 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
Mp6g21530.1 | POK, TTD8, ATVPS52 | component VPS52/POK of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g08942 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.08 | OrthoFinder output from all 47 species | |
Smo235014 | POK, TTD8, ATVPS52 | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g094090.4.1 | POK, TTD8,... | component VPS52/POK of GARP/EARP... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g15916 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g04119 | POK, TTD8, ATVPS52 | component *(VPS52/POK) of GARP/EARP... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e038047_P004 | POK, TTD8,... | component VPS52/POK of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004181 | metallocarboxypeptidase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051259 | protein complex oligomerization | IEP | HCCA |
BP | GO:0051260 | protein homooligomerization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007258 | Vps52 | 156 | 656 |
No external refs found! |