1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g12531

Pnu_g12531


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12531
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Adi_g005547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.03 OrthoFinder output from all 47 species
Cba_g10698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010256001 No alias CASP-like protein 2A1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
LOC_Os06g44610.1 LOC_Os06g44610 CASP-like protein 2C1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 4 153
No external refs found!