Heatmap: Cluster_33 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-2.47 0.44 -2.38 1.18
-0.3 0.25 -1.36 0.68
Pnu_g00734 (GMD1)
-0.34 -0.04 -0.52 0.62
-2.94 0.38 -2.26 1.24
-1.44 0.35 -3.4 1.17
-2.84 -0.26 -2.95 1.53
-0.74 0.35 -1.9 0.89
-5.13 0.26 -2.76 1.39
-0.65 0.56 -3.83 0.86
-1.44 0.73 -2.83 0.87
Pnu_g02008 (NIP6)
-2.2 0.79 -1.31 0.72
Pnu_g02108 (NPC1)
-1.25 0.32 -1.98 1.06
-2.84 0.62 -2.96 1.14
Pnu_g02136 (BAM1)
-1.88 0.78 -2.03 0.82
-3.03 -0.34 -1.57 1.46
-1.61 0.72 -3.58 0.96
-3.78 -0.39 -4.91 1.65
-1.61 0.39 -4.15 1.21
Pnu_g03151 (ABI1)
-0.44 0.31 -1.16 0.66
-0.9 0.21 -1.5 0.96
-2.23 0.31 -3.24 1.29
Pnu_g03402 (LSH6)
-3.38 0.27 -5.6 1.42
-0.36 0.15 -0.99 0.68
-1.44 0.65 -1.76 0.82
-1.66 0.52 - 1.17
-1.08 0.11 -5.49 1.28
-0.68 0.46 - 1.0
-0.98 0.35 -2.03 0.98
-1.5 0.72 -1.93 0.79
-0.81 0.57 -6.06 0.95
-0.3 0.1 -0.37 0.43
-1.64 0.56 -1.61 0.91
Pnu_g04256 (GSTU21)
-2.32 0.44 -3.67 1.24
-5.6 0.53 -4.81 1.32
-1.77 0.35 - 1.28
Pnu_g04700 (MIOX1)
-3.97 0.8 - 1.13
-0.75 -0.04 -1.34 1.03
- -0.66 - 1.75
-0.83 -0.18 -2.04 1.21
-2.38 0.09 -4.41 1.43
-3.33 0.98 - 0.94
-3.1 0.27 -3.04 1.36
-2.01 -0.17 -4.11 1.49
-0.73 0.47 -0.94 0.58
-3.46 0.35 -3.19 1.34
-1.6 0.17 -0.9 1.01
-0.91 0.51 -1.03 0.63
-4.27 0.67 -2.51 1.13
-1.57 0.56 - 1.13
Pnu_g06653 (LSH4)
-3.13 0.9 -4.48 0.98
-1.06 -0.01 -4.76 1.32
-1.62 0.04 -3.43 1.35
-1.91 0.54 -4.83 1.17
-3.32 0.94 -2.94 0.89
-0.99 0.72 -1.61 0.61
-3.57 0.11 -1.97 1.37
-3.71 0.31 -1.96 1.28
-0.45 0.05 -1.32 0.87
-1.11 -0.18 -1.38 1.18
Pnu_g08336 (DCR)
-0.64 0.23 -0.6 0.61
-7.01 1.11 - 0.87
Pnu_g08548 (MYB86)
-0.99 0.83 -8.19 0.77
-0.88 0.31 -2.59 1.03
Pnu_g08960 (OMR1)
-0.57 0.38 -1.11 0.64
-1.15 -0.07 -1.35 1.14
-0.92 0.49 -1.11 0.68
-2.63 -0.71 -4.51 1.67
-3.27 0.62 -4.48 1.21
-1.52 0.05 -4.64 1.36
-0.45 0.09 -2.06 0.97
-3.84 -0.17 - 1.6
-2.17 0.9 -4.29 0.9
Pnu_g10063 (RPP4)
-1.24 0.69 -3.9 0.92
Pnu_g10080 (RAD51B)
-0.31 0.29 -0.74 0.46
-1.07 0.08 -2.09 1.16
Pnu_g10155 (CYCP4;1)
-0.95 0.68 -2.48 0.76
Pnu_g10208 (CPK34)
-1.23 0.8 -3.95 0.82
-1.36 0.18 -4.87 1.29
-0.69 0.22 -1.3 0.86
-1.57 -0.04 -2.76 1.35
-2.35 0.9 - 0.95
Pnu_g11203 (RLP44)
-1.87 0.41 -3.71 1.22
Pnu_g11269 (ACL5)
-1.93 0.58 -5.48 1.15
-2.44 -0.04 -7.7 1.51
Pnu_g11378 (TINY2)
-3.38 0.66 -2.9 1.13
-3.78 0.33 -11.08 1.42
-1.94 0.76 -1.41 0.74
Pnu_g11551 (TT7)
-2.54 0.51 -3.65 1.22
-0.87 0.56 -3.07 0.89
-1.79 0.5 - 1.2
-0.25 0.02 -0.45 0.49
-0.88 0.51 -1.34 0.71
-1.4 0.59 -1.71 0.86
-1.28 -0.11 -6.95 1.41
-0.37 0.22 -0.67 0.52
-3.36 -0.3 -3.6 1.59
-1.04 0.33 -6.49 1.17
-1.58 0.19 -4.86 1.32
-1.6 0.43 - 1.22
-0.86 -0.31 -3.06 1.34
-0.2 0.18 -0.37 0.3
Pnu_g12905 (NTT)
-6.99 0.83 - 1.14
- 0.65 -4.76 1.26
Pnu_g13487 (PAO5)
-1.31 0.75 -1.88 0.72
Pnu_g13698 (KT1)
-1.63 0.44 -7.51 1.21
Pnu_g13942 (PTR2)
-1.69 0.56 -3.95 1.1
Pnu_g13956 (LRL3)
-2.47 0.14 -4.18 1.41
Pnu_g14022 (DFL1)
- 0.74 -3.1 1.15
-1.04 -0.09 -1.6 1.17
-0.59 0.23 -1.77 0.91
-2.73 0.2 - 1.43
-2.38 0.59 -3.05 1.13
-4.14 -0.24 - 1.63
-1.14 0.11 -2.65 1.21
Pnu_g15160 (PMT5)
-0.88 0.73 -2.02 0.64
- 1.12 - 0.87
-1.24 0.42 -3.63 1.11
-0.86 0.23 -2.36 1.06
-2.07 0.25 -4.33 1.34
-2.34 -0.39 -4.63 1.58
Pnu_g16820 (FBW2)
-0.54 0.02 -1.1 0.87
-7.67 0.33 -6.34 1.45
Pnu_g17072 (GAD)
-0.71 0.33 - 1.09
-4.15 0.35 -8.15 1.42
-0.71 0.57 -2.78 0.82
-1.46 0.74 - 0.97
Pnu_g17475 (ATN1)
-0.18 0.18 -0.61 0.41
-2.19 0.39 - 1.3
-0.44 0.24 -1.19 0.72
Pnu_g17725 (AAP3)
-7.61 -0.8 -2.41 1.69
-0.32 0.23 -0.73 0.51
-0.89 0.27 -2.09 1.01
-4.09 0.16 -3.19 1.44
Pnu_g18416 (NIP6)
-0.75 -0.53 -1.72 1.27
-1.4 -0.01 -0.92 1.07
Pnu_g18663 (SHL)
-2.05 0.29 - 1.34
-1.36 -0.07 -2.09 1.28
-2.83 -0.07 -3.85 1.5
-1.75 -0.25 -2.65 1.43
-1.93 0.58 -4.29 1.13
-0.74 0.38 -1.98 0.88
-1.31 0.42 -5.1 1.16
-5.45 0.08 -3.59 1.5
-1.37 0.08 -3.5 1.3
-0.13 0.08 -0.26 0.25
-1.69 0.12 -6.15 1.37
Pnu_g19719 (BGAL8)
-0.7 -0.09 -1.66 1.09
Pnu_g19907 (UXS4)
-0.71 -0.14 -0.79 0.93
-3.31 0.01 -3.77 1.5
-1.22 0.52 -4.07 1.06
-0.29 0.13 -0.78 0.59
- 0.42 - 1.41
-1.19 0.37 -5.02 1.17
-1.42 0.45 -4.81 1.15
Pnu_g20483 (ACL5)
-2.18 0.97 -7.28 0.85
-3.38 0.21 - 1.46
Pnu_g20593 (SSL3)
-0.15 0.13 -0.37 0.3
-0.78 0.44 -5.82 1.03
-1.58 0.45 -2.82 1.11
-0.66 0.41 -1.07 0.64
-0.49 0.28 -2.41 0.92
Pnu_g22755 (SAMDC)
-1.42 0.1 -1.22 1.09
-1.51 0.51 -4.81 1.13
-2.66 0.24 -6.94 1.41
-0.42 0.15 -0.22 0.36
-2.33 0.02 -4.09 1.45
Pnu_g24505 (SLP2)
-1.49 0.58 -1.19 0.78
-0.74 0.46 -2.52 0.89
-1.94 0.44 -2.48 1.14
-1.55 0.58 -4.97 1.09
-0.6 0.46 -2.28 0.82
-1.25 0.25 -0.91 0.89
-0.58 0.17 -1.9 0.96
-1.17 -0.01 -1.34 1.12
-0.76 0.36 -0.6 0.55
-4.48 0.13 -11.24 1.51
-1.84 0.84 -3.07 0.86
-2.75 0.45 -5.32 1.3
-3.65 0.83 -1.92 0.91
-0.98 0.53 -2.37 0.9
Pnu_g31021 (SWEET5)
-3.49 0.42 - 1.37
-1.11 0.27 -5.47 1.2
-0.76 0.23 -3.9 1.12
Pnu_g31153 (BPS1)
-0.99 0.68 -2.03 0.73
-1.09 0.25 -2.18 1.08
-1.4 0.68 -9.1 1.01
-1.37 0.65 - 1.03
-1.69 -0.17 -1.19 1.24
Pnu_g32389 (ERD9)
-1.33 0.54 -1.56 0.85
-0.45 -0.01 -0.64 0.71
-2.42 0.64 -4.0 1.13
Pnu_g33316 (RBOHF)
-0.8 0.15 -2.36 1.09
-0.81 0.45 - 1.04
-0.9 0.65 -5.18 0.9

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.