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  5. Als_g21762

Als_g21762


Description : not classified & original description: none


Gene families : OG0000180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g21762
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00122370 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.xyloglucan... 0.05 OrthoFinder output from all 47 species
AMTR_s00039p00107450 MUR3, KAM1,... Cell... 0.05 OrthoFinder output from all 47 species
AT2G20370 MUR3, KAM1 Exostosin family protein 0.03 OrthoFinder output from all 47 species
AT2G31990 No alias Exostosin family protein 0.04 OrthoFinder output from all 47 species
Adi_g017997 GT18, ATGT18 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079275 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g103052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13604 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Als_g32482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g36616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03416 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
Aop_g00706 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39217 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18199.t1 GT18, ATGT18,... galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72243.t1 Aspi01Gene72243 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.24G001500.1 GT18, ATGT18,... galactosyltransferase *(XLT2) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G038800.1 Ceric.34G038800 not classified & original description: pacid=50623339... 0.04 OrthoFinder output from all 47 species
Dcu_g06239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13033 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g19689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33369 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01626 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05961 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08576 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12520 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g17408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09780 MUR3, KAM1 Xyloglucan galactosyltransferase MUR3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os10g32170.1 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
Len_g09002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428118g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species
MA_2898973g0010 No alias Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species
Mp6g05660.1 No alias Probable xyloglucan galactosyltransferase GT11... 0.02 OrthoFinder output from all 47 species
Msp_g29118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41625 GT18, ATGT18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05376 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08902 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g21948 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g15981 GT18, ATGT18 galactosyltransferase *(XLT2) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03909 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0083.g018133 No alias not classified & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Sam_g08551 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19751 No alias galactosyltransferase *(XLT2) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g079040.1.1 Solyc08g079040 Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species
Solyc09g064470.3.1 MUR3, KAM1,... Xyloglucan galactosyltransferase MUR3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g056260.1.1 RHS8, Solyc12g056260 xyloglucan galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Spa_g06520 MUR3, KAM1 1,2-beta-galactosyltransferase *(MUR3-like) & original... 0.03 OrthoFinder output from all 47 species
Tin_g38834 RHS8 galacturonosyltransferase *(XUT1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000359_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.02 OrthoFinder output from all 47 species
Zm00001e000362_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Zm00001e004643_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Zm00001e004647_P001 MUR3, KAM1,... Xyloglucan galactosyltransferase KATAMARI1 homolog... 0.03 OrthoFinder output from all 47 species
Zm00001e037897_P001 Zm00001e037897 Probable xyloglucan galactosyltransferase GT19... 0.02 OrthoFinder output from all 47 species
Zm00001e041419_P001 GT18, ATGT18,... Xyloglucan galactosyltransferase XLT2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 113 462
No external refs found!