Als_g20940 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g20940

Target	Alias	Description	ECC score	Gene Family Method
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.03	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	OrthoFinder output from all 47 species
Adi_g012796	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g105053	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g46837	WRKY3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25447	ATWRKY59, WRKY59	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38597	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.25G001000.1	ATWRKY24,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ehy_g23297	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os05g25770.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g28971	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g41417	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g36602	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g05882	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26994	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14502	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16962	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03844	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13035	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016622_P001	ATWRKY50,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e030443_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	192	248
IPR003657	WRKY_dom	374	430

External Links

No external refs found!

Als_g20940 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation