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  5. Pnu_g12380

Pnu_g12380 (SLY1)


Aliases : SLY1

Description : substrate adaptor of SCF E3 ubiquitin ligase *(SLY) & original description: none


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12380
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G48170 SLY2 F-box family protein 0.02 OrthoFinder output from all 47 species
Adi_g022605 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Mp1g06600.1 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Solyc10g083230.1.1 Solyc10g083230 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e022823_P002 SLY1, Zm00001e022823 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 58 98
No external refs found!