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  5. Als_g17869

Als_g17869


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g17869

Target Alias Description ECC score Gene Family Method Actions
Adi_g081665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09717.t1 Aspi01Gene09717 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65881.t1 Aspi01Gene65881 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G009600.1 Ceric.24G009600 not classified & original description: pacid=50628679... 0.04 OrthoFinder output from all 47 species
Ceric.38G005900.1 Ceric.38G005900 not classified & original description: pacid=50579413... 0.03 OrthoFinder output from all 47 species
Ehy_g12355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437231g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007453 No alias not classified & original description: CDS=206-1297 0.04 OrthoFinder output from all 47 species
Sam_g08482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 377 681
IPR006868 DUF630 1 59
No external refs found!