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  5. Als_g16052

Als_g16052


Description : not classified & original description: none


Gene families : OG0008626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008626_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g16052
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00260200 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G12800 No alias Nucleic acid-binding, OB-fold-like protein 0.02 OrthoFinder output from all 47 species
Ala_g03977 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G040000.1 Ceric.34G040000 not classified & original description: pacid=50623148... 0.04 OrthoFinder output from all 47 species
Dcu_g09585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g02390.1 LOC_Os02g02390 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g04234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g11640.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g33654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016351 No alias delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Solyc08g007950.3.1 Solyc08g007950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013455_P001 Zm00001e013455 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 1033 1104
No external refs found!