1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g15651

Als_g15651


Description : not classified & original description: none


Gene families : OG0003649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003649_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15651
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00070440 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AT5G15510 No alias TPX2 (targeting protein for Xklp2) protein family 0.09 OrthoFinder output from all 47 species
AT5G37478 No alias TPX2 (targeting protein for Xklp2) protein family 0.03 OrthoFinder output from all 47 species
Adi_g080102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21234 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene04620.t1 Aspi01Gene04620 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene08613.t1 Aspi01Gene08613 not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ceric.02G078000.1 Ceric.02G078000 not classified & original description: pacid=50583911... 0.1 OrthoFinder output from all 47 species
Ceric.10G034200.1 Ceric.10G034200 not classified & original description: pacid=50612324... 0.16 OrthoFinder output from all 47 species
Dcu_g10790 No alias not classified & original description: none 0.21 OrthoFinder output from all 47 species
GSVIVT01011508001 No alias No description available 0.16 OrthoFinder output from all 47 species
Gb_00785 No alias no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os03g11400.1 LOC_Os03g11400 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Len_g15527 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g27421 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
MA_8291g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Mp1g24770.1 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Mp3g08770.1 No alias no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
Msp_g14117 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29711 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Ppi_g17903 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc02g066980.1.1 Solyc02g066980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g067100.3.1 Solyc02g067100 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc02g094750.1.1 Solyc02g094750 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g014550.3.1 Solyc04g014550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g51324 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g44369 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e000831_P002 Zm00001e000831 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e018147_P001 Zm00001e018147 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038734_P002 Zm00001e038734 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 532 606
No external refs found!