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  5. Als_g15522

Als_g15522


Description : rhamnosyltransferase *(RRT) & original description: none


Gene families : OG0001379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15522

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00267640 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g089269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066482 No alias rhamnosyltransferase *(RRT) & original description: CDS=495-2240 0.04 OrthoFinder output from all 47 species
Ceric.04G018300.1 Ceric.04G018300 rhamnosyltransferase *(RRT) & original description:... 0.04 OrthoFinder output from all 47 species
Len_g18555 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41169 No alias rhamnosyltransferase *(RRT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02274 No alias rhamnosyltransferase *(RRT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114730.3.1 Solyc03g114730 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species
Zm00001e001544_P002 Zm00001e001544 rhamnosyltransferase 0.04 OrthoFinder output from all 47 species
Zm00001e015704_P001 Zm00001e015704 rhamnosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e034452_P002 Zm00001e034452 rhamnosyltransferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 149 469
No external refs found!