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  5. Als_g14719

Als_g14719 (LOS1)


Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: none


Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14719

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00133570 LOS1,... Protein biosynthesis.translation elongation.eEF2... 0.04 OrthoFinder output from all 47 species
AT1G56070 LOS1 Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 OrthoFinder output from all 47 species
Aev_g17437 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22337 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G007600.1 LOS1, Ceric.25G007600 mRNA-translocation factor *(eEF2)) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021464.39 LOS1 Protein biosynthesis.translation elongation.eEF2... 0.01 OrthoFinder output from all 47 species
Cre12.g516200 LOS1 Protein biosynthesis.translation elongation.eEF2... 0.01 OrthoFinder output from all 47 species
Dde_g19221 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020404001 LOS1 Elongation factor 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g08473 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12274 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23642 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10285571g0010 LOS1 Elongation factor 2 OS=Beta vulgaris... 0.02 OrthoFinder output from all 47 species
MA_3981252g0010 LOS1 Elongation factor 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Mp2g20190.1 LOS1 mRNA-translocation factor (eEF2) 0.04 OrthoFinder output from all 47 species
Mp2g20200.1 LOS1 mRNA-translocation factor (eEF2) 0.04 OrthoFinder output from all 47 species
Msp_g08640 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13540 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29331 LOS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32430 LOS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c7_1950V3.1 LOS1, Pp3c7_1950 Ribosomal protein S5/Elongation factor G/III/V family protein 0.01 OrthoFinder output from all 47 species
Solyc08g062910.4.1 LOS1, Solyc08g062910 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species
Solyc08g062920.3.1 LOS1, Solyc08g062920 mRNA-translocation factor (eEF2) 0.04 OrthoFinder output from all 47 species
Spa_g26568 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006293_P001 LOS1, Zm00001e006293 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species
Zm00001e006294_P001 LOS1, Zm00001e006294 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species
Zm00001e029078_P002 LOS1, Zm00001e029078 mRNA-translocation factor (eEF2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 17 342
IPR004161 EFTu-like_2 394 466
IPR000640 EFG_V-like 724 810
IPR041095 EFG_II 487 549
IPR005517 Transl_elong_EFG/EF2_IV 611 720
No external refs found!