Als_g14365 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g14365

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00229970	WRKY48,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00013p00160270	WRKY75,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00023p00102530	WRKY33,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00128140	WRKY42,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00201830	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00088p00164440	AtWRKY20,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.02	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.03	OrthoFinder output from all 47 species
AT5G56270	WRKY2, ATWRKY2	WRKY DNA-binding protein 2	0.01	OrthoFinder output from all 47 species
Adi_g021107	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g10428	WRKY49, ATWRKY49	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene18896.t1	ATWRKY57,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0052.g031586	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-864	0.03	OrthoFinder output from all 47 species
Cba_g25928	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38597	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.29G026500.1	Ceric.29G026500	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ehy_g18512	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g31501	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025562001	WRKY44, TTG2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_40261	WRKY75, ATWRKY75	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g43560.1	LOC_Os02g43560	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os05g45230.1	WRKY43,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Len_g11782	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g41417	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Len_g50898	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g05639	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_103616g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_20468g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp2g20960.1	WRKY62, ATWRKY62	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp8g10640.1	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Ore_g09401	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g11298	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14502	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g22356	ATWRKY57, WRKY57	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g34683	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g066370.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Spa_g16962	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g19666	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37337	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e001512_P003	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e025096_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e028011_P002	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e029445_P001	WRKY3, Zm00001e029445	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e030443_P001	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e040032_P002	WRKY44, TTG2,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0005347	ATP transmembrane transporter activity	IEP	HCCA
MF	GO:0005471	ATP:ADP antiporter activity	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006862	nucleotide transport	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009229	thiamine diphosphate biosynthetic process	IEP	HCCA
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	HCCA
MF	GO:0015217	ADP transmembrane transporter activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	HCCA
BP	GO:0015748	organophosphate ester transport	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0030975	thiamine binding	IEP	HCCA
BP	GO:0042357	thiamine diphosphate metabolic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	HCCA
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0043178	alcohol binding	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	430	486
IPR003657	WRKY_dom	254	304

External Links

No external refs found!

Als_g14365 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation