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  5. Als_g09438

Als_g09438 (CLPS3)


Aliases : CLPS3

Description : component *(Clp1) of Cleavage Factor II (CF-IIm) complex & original description: none


Gene families : OG0003520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09438

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene27178.t2 CLPS3, Aspi01Gene27178 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34271.t1 CLPS3, Aspi01Gene34271 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.03 OrthoFinder output from all 47 species
Dcu_g03837 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.06 OrthoFinder output from all 47 species
Msp_g12143 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.04 OrthoFinder output from all 47 species
Pir_g09435 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species
Pir_g49903 CLPS3 component *(Clp1) of Cleavage Factor II (CF-IIm) complex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR032319 CLP1_P 122 310
IPR032324 Clp1_N 6 97
IPR010655 Clp1_C 315 421
No external refs found!