1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g08905

Als_g08905 (ATXYL1, XYL1, TRG1)


Aliases : ATXYL1, XYL1, TRG1

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08905

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.04 OrthoFinder output from all 47 species
AT1G68560 ATXYL1, XYL1, TRG1 alpha-xylosidase 1 0.02 OrthoFinder output from all 47 species
Aspi01Gene49732.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g18090 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12611 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g30299 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01037959001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 OrthoFinder output from all 47 species
Gb_06380 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species
LOC_Os06g46284.2 LOC_Os06g46284 Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g56805 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13282 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g56465 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Solyc04g007150.3.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
Solyc04g009630.3.1 Solyc04g009630 Alpha-glucosidase OS=Spinacia oleracea... 0.04 OrthoFinder output from all 47 species
Spa_g08972 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19560 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017022_P001 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025887 Glyco_hydro_31_N_dom 161 225
IPR031727 Gal_mutarotase_N 41 157
IPR000322 Glyco_hydro_31 246 737
No external refs found!