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  5. Als_g08613

Als_g08613


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08613
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00209440 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00068p00134210 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT2G01630 No alias O-Glycosyl hydrolases family 17 protein 0.05 OrthoFinder output from all 47 species
Aev_g17839 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g19383 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07760 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02562 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04634.t1 Aspi01Gene04634 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G000900.1 Ceric.07G000900 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.22G064500.1 Ceric.22G064500 EC_3.2 glycosylase & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.27G002300.1 Ceric.27G002300 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10690 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04811 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09171 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22399 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011682001 No alias Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01030716001 No alias Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g12140.1 LOC_Os03g12140 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g02853 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g13012 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04815 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g19855 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g007910.3.1 Solyc04g007910 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g005000.4.1 Solyc08g005000 Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e000870_P002 Zm00001e000870 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e010612_P001 Zm00001e010612 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e035344_P001 Zm00001e035344 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e038695_P001 Zm00001e038695 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 369 439
IPR000490 Glyco_hydro_17 31 344
No external refs found!