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  5. Als_g08058

Als_g08058 (ARI7, ATARI7)


Aliases : ARI7, ATARI7

Description : RBR-Ariadne-class E3 ubiquitin ligase & original description: none


Gene families : OG0001677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08058

Target Alias Description ECC score Gene Family Method Actions
AT2G31510 ARI7, ATARI7 IBR domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g021744 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Aob_g18815 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Ceric.15G024600.1 ARI7, ATARI7,... RBR-Ariadne-class E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Dcu_g46186 ARI8, ATARI8 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.07 OrthoFinder output from all 47 species
Ehy_g08535 ARI8, ATARI8 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Lfl_g34266 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.04 OrthoFinder output from all 47 species
MA_10434081g0010 ARI8, ATARI8 RBR-Ariadne-class E3 ubiquitin ligase 0.02 OrthoFinder output from all 47 species
MA_88915g0010 ARI8, ATARI8 RBR-Ariadne-class E3 ubiquitin ligase 0.04 OrthoFinder output from all 47 species
Nbi_g03771 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Ore_g09595 ARI8, ATARI8 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03149 ARI7, ATARI7 RBR-Ariadne-class E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Sam_g37809 No alias RBR-Ariadne-class E3 ubiquitin ligase & original... 0.04 OrthoFinder output from all 47 species
Smo178621 ARI8, ATARI8 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Smo180454 ARI8, ATARI8 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Zm00001e003726_P005 ARI8, ATARI8,... RBR-Ariadne-class E3 ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Zm00001e007730_P001 ARI8, ATARI8,... RBR-Ariadne-class E3 ubiquitin ligase 0.02 OrthoFinder output from all 47 species
Zm00001e024244_P001 ARI8, ATARI8,... RBR-Ariadne-class E3 ubiquitin ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002867 IBR_dom 296 343
IPR002867 IBR_dom 217 279
IPR045840 Ariadne 366 529
No external refs found!