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  5. Als_g07371

Als_g07371


Description : not classified & original description: none


Gene families : OG0000797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07371
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Ala_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02628 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.02G037500.1 Ceric.02G037500 not classified & original description: pacid=50584038... 0.03 OrthoFinder output from all 47 species
Ceric.14G074600.1 Ceric.14G074600 not classified & original description: pacid=50634622... 0.02 OrthoFinder output from all 47 species
Ceric.21G063200.1 Ceric.21G063200 not classified & original description: pacid=50603116... 0.02 OrthoFinder output from all 47 species
GSVIVT01021200001 No alias U-box domain-containing protein 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08776 No alias U-box domain-containing protein 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_21721 No alias U-box domain-containing protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_41829 No alias U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g17690.1 No alias U-box domain-containing protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g14525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07119 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g02730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014762 No alias not classified & original description: CDS=762-1922 0.03 OrthoFinder output from all 47 species
Solyc08g042100.3.1 Solyc08g042100 U-box domain-containing protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g10180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 263 301
No external refs found!