Als_g05705 (BBM)

Aliases : BBM

Description : AP2-type transcription factor *(WRI/AIL) & original description: none

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g05705
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00227390	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00077750	DRG, CKC, CKC1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.08	OrthoFinder output from all 47 species
AT3G54320	WRI1, ATWRI1, ASML1, WRI	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.02	OrthoFinder output from all 47 species
AT5G65510	AIL7	AINTEGUMENTA-like 7	0.02	OrthoFinder output from all 47 species
Adi_g115175	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Aev_g39456	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ala_g04901	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g26834	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g28572	BBM	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14196	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Als_g14935	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Als_g47612	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aop_g05039	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.11	OrthoFinder output from all 47 species
Aspi01Gene18157.t1	Aspi01Gene18157	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene38022.t1	Aspi01Gene38022	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene55596.t2	Aspi01Gene55596	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene59204.t1	Aspi01Gene59204	RAM1-dependent transcription factor *(WRI5) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010452	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0207.g057931	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cba_g06694	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cba_g11379	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cba_g13334	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cba_g59950	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ceric.12G002600.1	Ceric.12G002600	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Ceric.14G085600.1	Ceric.14G085600	AP2-type transcription factor *(WRI/AIL) & original...	0.17	OrthoFinder output from all 47 species
Ceric.31G036600.1	Ceric.31G036600	AP2-type transcription factor *(WRI/AIL) & original...	0.06	OrthoFinder output from all 47 species
Ceric.32G008600.1	BBM, Ceric.32G008600	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cre08.g385350	HRE1	No description available	0.01	OrthoFinder output from all 47 species
Dac_g06510	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Dac_g09110	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.06	OrthoFinder output from all 47 species
Dcu_g10360	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01009293001	DRG, CKC, CKC1, ANT	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
GSVIVT01009294001	DRG, CKC, CKC1, ANT	AP2-like ethylene-responsive transcription factor ANT...	0.07	OrthoFinder output from all 47 species
LOC_Os01g59780.1	WRI1, ATWRI1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Len_g29123	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Lfl_g14576	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_98095g0010	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Mp8g11450.1	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Msp_g38706	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.09	OrthoFinder output from all 47 species
Nbi_g01472	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g29022	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ore_g17459	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ore_g36760	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g19044	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018230	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Sam_g01778	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g05070	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g092050.3.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Spa_g07247	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Tin_g12768	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	391	449
IPR001471	AP2/ERF_dom	493	543

External Links

No external refs found!

Als_g05705 (BBM)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation