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  5. Als_g05205

Als_g05205 (PSBR)


Aliases : PSBR

Description : component *(PsbR) of PS-II complex & original description: none


Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00162140 PSBR,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.04 OrthoFinder output from all 47 species
AT1G79040 PSBR photosystem II subunit R 0.13 OrthoFinder output from all 47 species
Adi_g011483 PSBR component *(PsbR) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Aev_g08753 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13057 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g04077 PSBR component *(PsbR) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g27127 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29630 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g02302 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.16G056100.1 PSBR, Ceric.16G056100 component *(PsbR) of PS-II complex & original... 0.01 OrthoFinder output from all 47 species
Ceric.20G086200.1 PSBR, Ceric.20G086200 component *(PsbR) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
Cre06.g261000 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.08 OrthoFinder output from all 47 species
Dac_g12213 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g32722 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g25420 PSBR component *(PsbR) of PS-II complex & original description: none 0.19 OrthoFinder output from all 47 species
Dcu_g28297 PSBR component *(PsbR) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g00341 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g22404 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020484001 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.11 OrthoFinder output from all 47 species
Gb_04149 PSBR component PsbR of PS-II complex 0.08 OrthoFinder output from all 47 species
LOC_Os08g10020.1 PSBR, LOC_Os08g10020 component PsbR of PS-II complex 0.1 OrthoFinder output from all 47 species
Len_g00088 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g16031 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18574 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38512 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
MA_282g0010 PSBR component PsbR of PS-II complex 0.1 OrthoFinder output from all 47 species
Mp3g05840.1 PSBR component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species
Msp_g02196 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g40620 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g06143 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g06144 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g25679 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g09918 PSBR component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g31183 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_5650V3.1 PSBR, Pp3c16_5650 photosystem II subunit R 0.05 OrthoFinder output from all 47 species
Pp3c27_2340V3.1 PSBR, Pp3c27_2340 photosystem II subunit R 0.02 OrthoFinder output from all 47 species
Ppi_g12793 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27322 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27323 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024344 PSBR component *(PsbR) of PS-II complex & original... 0.08 OrthoFinder output from all 47 species
Sam_g12723 No alias component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Smo231914 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
Solyc07g066310.3.1 PSBR, Solyc07g066310 component PsbR of PS-II complex 0.08 OrthoFinder output from all 47 species
Spa_g03368 PSBR component *(PsbR) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g07988 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e021601_P001 PSBR, Zm00001e021601 component PsbR of PS-II complex 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 52 149
No external refs found!